publications

  1. Role of explicit electrostatic interactions in molecular ligand dissociation from single binding sites
    A. Erbaş, M. O. de la Cruz, J. F. Marko (Submitted) (2017)
  2. Co-Assembly of Peptide Amphiphiles and Lipids into Supramolecular Nanostructures Driven by Anion-π Interactions
    Z. Yu, A. Erbaş, F. Tantakitti, L. C. Palmer, J. A. Jackman,  M. O. de la Cruz,  N. Cho, S. I. StuppJ. Am. Chem. Soc.  (2017). DOI:10.1021/jacs.7b02058
  3. Facilitated Dissociation of Transcription Factors from Single DNA Binding Sites
    R. I. Kamar, E. J. Banigan, A. Erbaş, R. D. Giuntoli, M. Olvera de la Cruz, R. C. Johnson, J. F. Marko, Proc. Natl. Acad. Sci. U.S.A. (2017). DOI:10.1073/pnas.1701884114
  4. Ionic conductivity in polyelectrolyte hydrogels,
    H. Li, A. Erbaş, J. Zwanikken, M. O. de la Cruz, Macromolecules (2016). DOI: 10.1021/acs.macromol.6b01276
  5.  Interactions between polyelectrolyte gel surfaces,
    A. Erbaş, M. O. de la Cruz, Macromolecules (2016). DOI: 10.1021/acs.macromol.6b01416
  6. Morphology-induced conductivity in dry ionic liquid,
    A. Erbas, M. Olvera de la Cruz,  Phys. Chem. Chem. Phys.  (2016).  DOI: 10.1039/C5CP07090B
  7. Energy conversion in polyelectrolyte hydrogels (cover issue),
    A. Erbas, M. Olvera de la Cruz, ACS Macro Letters  (2015). DOI:10.1021/acsmacrolett.5b00363
  8. Friction between ring-polymer brushes,
    A. Erbas, J. Paturej, Soft Matter  (2015). DOI: 10.1039/C4SM02818J
  9. Detachment of semiflexible polymer chains from a substrate – a Molecular Dynamics investigation,
    J. Paturej, A. Erbas, A. Milchev, V.G. Rostiashvili, J. Chem. Phys. 141, 22, (2014). DOI: 10.1063/1.4902551
  10. Confinement-Dependent Friction in Peptide-Bundles,
    A. Erbas and R. R. Netz, Biophysical J. 104, 6, (2013).  DOI: 10.1016/j.bpj.2013.02.008
  11. Viscous Friction of Hydrogen-Bonded Matter,
    A. Erbas, D. Horinek and R. R. Netz, J. Am. Chem. Soc. 134 , pp 623 (2012). DOI: 10.1021/ja209454a
  12. Viscous compressible hydrodynamics at planes, spheres and cylinders with finite surface slip (cover issue),
    A. Erbas, R. Podgornik and R. R. Netz, Euro. Phys. E 32, pp 147 (2010). DOI: 10.1140/epje/i2010-10610-7
  13. Phase diagrams and crossover in spatially anisotropic d=3 Ising, XY magnetic, and percolation systems: Exact Renormalization – Group Solutions of Hierarchical Models,
    A. Erbas, A. Tuncer, B. Yücesoy, and A. N. Berker, Phys. Rev. E 72, 026129 (2005).  DOI: 10.1103/PhysRevE.72.026129

  14. pre-prints (available on request)

    • Chromatin compaction state is a major determinant of nuclear blebbing and deformations
      Andrew D. Stephens et al.  (2017)
    • Non-Linear and Linear Friction of Polymer Brushes,
      A. Erbaş, E. Zhulina and M. Rubinstein (2017)
    • Loop polymers reduce friction by avoiding entanglement (2017)
      A. Erbas and J. Paturej
    • Interactions between amphiphilic molecules and polyelectrolyte gels
      H. Sai, D. Huang,  A. Erbas, M. O. de la Cruz, S. Stupp

Theses

  • PhD Thesis. Friction of Soft Matter at  the  Nano-Scale  (Roland R. Netz).
    Abstract: English, German, Turkish
  • MSc Thesis. Two Statistical Physics Problems: Phase Diagram Calculation of Spatially Anisotropic, Surfaced d= 3 Layered Systems by Renormalization-Group Theory and Vehicle-Route Optimization with Traffic Factors for Migros Home Delivery System by Simulated Annealing  (A. Nihat Berker).
    Abstract: English, Turkish
  • BSc Thesis. Heat Capacity of Hierarchical Ising Lattices   (A. Nihat Berker). Abstract: English, Turkish

 

 

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See  Google Scholar for a complete list of publications.