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Pathway-PDM is a method for identifying differentially regulated pathways. Pathway-PDM is nonparametric and completely data-driven (no user-set parameters). Importantly, Pathway-PDM is able to detect altered pathways even when the individual genes are not differentially expressed or exhibit nonlinear and non-convex relationships.
- Complete source package: PDM_1.1.tar.gz
- Package vignette decribing the usage of the PDM package: PDM.pdf
- Package manual: PDM-manual.pdf