Lab-Grown Methods

Network reconstruction algorithms

Algorithms to reconstruct regulatory networks from observed omics data, optionally using a reference network (eg, from pathway databases) as a starting point.

Network analysis methods

Methods to analyze high-throughput data in the context of pathway networks (either derived from pathway databases or inferred by other means).

Methods for circadian transcriptomics

Software packages to enable the optimal design and analysis of circadian gene expression data.